Skip to content

Navigation Menu

All Features
- By Stage
  Enterprises
  Team
  Startups
  Nonprofits
- By Industry
  Healthcare
  Financial services
  Manufacturing
  Government
  See all industries
- Evaluate GitHub
  Why GitHub
  Customer Stories
  Business insights
  Trust Center
- Add-ons
  GitHub Advanced SecurityEnterprise-grade code security
  Copilot for businessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
- Learn & Connect
  Documentation
  Resource center
  Blog
  Events & webinars
  Community Forum
  Customer Stories
  Integrations
- Support
  Customer support
  Training
  GitHub Status
- Company
  About
  Partners
  Changelog
- GitHub Universe
  GitHub UniverseThe event for developers, by developers — talks, workshops, and what’s next for GitHub.
Pricing

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

High Performance Computing in Biology

High performance computational biology at the University of Illinois

16 followers
University of Illinois at Urbana-Champaign
http://www.hpcbio.illinois.edu

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

dada2-rs dada2-rs Public

DADA2, reimplemented in Rust

Rust 9 2

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All C C++ Common Workflow Language CSS Groovy HTML JavaScript Jupyter Notebook Makefile Nextflow Perl Python R Rust Shell

Sort

Select order

Last updated Name Stars

Showing 10 of 108 repositories

dada2 Public Forked from benjjneb/dada2
Accurate sample inference from amplicon data with single nucleotide resolution

HPCBio/dada2's past year of commit activity

R 0 LGPL-3.0 178 0 0 Updated Nov 3, 2026
workflows-nextflow Public Forked from carpentries-incubator/workflows-nextflow
Workflow management with Nextflow and nf-core

HPCBio/workflows-nextflow's past year of commit activity

Nextflow 0 42 0 0 Updated Nov 3, 2026
hpcbio-swc-shell-novice-sp2025 Public

HPCBio/hpcbio-swc-shell-novice-sp2025's past year of commit activity

Shell 0 0 0 0 Updated Nov 3, 2026
hpcbio-swc-git-novice-summer2026 Public Forked from swcarpentry/git-novice
Version Control with Git

HPCBio/hpcbio-swc-git-novice-summer2026's past year of commit activity

0 976 0 0 Updated Nov 3, 2026
dada2-rs Public
DADA2, reimplemented in Rust

HPCBio/dada2-rs's past year of commit activity

Rust 9 LGPL-3.0 2 47 1 Updated Nov 1, 2026
WFA2-lib Public Forked from Marco-Sola-Lab/WFA2-lib
WFA-lib: Wavefront alignment algorithm library v2

HPCBio/WFA2-lib's past year of commit activity

C 0 57 0 0 Updated Oct 23, 2026
wfa2lib-rs Public Forked from COMBINE-lab/wfa2lib-rs
A rust-native port of wfa2lib

HPCBio/wfa2lib-rs's past year of commit activity

Rust 0 BSD-3-Clause 3 10 0 Updated Oct 19, 2026
old-configs Public Forked from nf-core/configs
Config files used to define parameters specific to compute environments at different Institutions

HPCBio/old-configs's past year of commit activity

Nextflow 0 MIT 378 0 1 Updated Oct 13, 2026
funcscan Public Forked from nf-core/funcscan
(Meta-)genome screening for functional and natural product gene sequences

HPCBio/funcscan's past year of commit activity

Nextflow 0 MIT 43 0 0 Updated Sep 16, 2026
TADA Public
TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region

HPCBio/TADA's past year of commit activity

Nextflow 21 MIT 14 28 (2 issues need help) 0 Updated Sep 9, 2026

View all repositories

People

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2026 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.