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1. Hex-maze Hex-maze Public

   Toolkit for the hex maze task developed by the Berke Lab at UCSF. Generate, visualize, and analyze maze configurations and barrier change sequences, and fit reinforcement learning models (model-fre…

   Python 7 5

2. jdb_to_nwb jdb_to_nwb Public

   Processes raw electrophysiology, fiber photometry, position tracking, and behavioral data from the Berke Lab's hex maze task into Spyglass-compatible NWB files, with figures for each session.

   Python 7 3

3. Hex-maze-spyglass Hex-maze-spyglass Public

   Spyglass extension package for hex maze behavioral and neural analysis.

   Python 3 3

4. hodgkin-huxley hodgkin-huxley Public

   Course materials I made for UCSF Neuro 201A: Python/MATLAB simulations of the Hodgkin-Huxley (1952) equations. Explore how the gating variables shape ionic currents and the action potential, and re…

   MATLAB